Try to automatically fit sections into open spaces in the fixed area.

Enhance layoutrom.py script to find and locate sections into fixed area.
Have layoutrom.py create output file instead of using redirect from make.
Don't use freespace2 for bios tables in f segment - freespace in fixed
    area is now automatically filled.
Change checkrom script to test final_code16_end instead of _start -
    this improves catching of alignment errors.
Don't align gdt to 8 bytes - it causes whole section to be aligned,
    which causes entry point to be misaligned.
Explicitly reserve space for variables in fixed area so that the space
    for them is not auto-filled.
diff --git a/tools/checkrom.py b/tools/checkrom.py
index 6b5f1e9..d03c794 100755
--- a/tools/checkrom.py
+++ b/tools/checkrom.py
@@ -17,24 +17,22 @@
         except:
             pass
 
-    c16s = syms['code16_start'] + 0xf0000
-    c32s = syms['final_code16_start']
-    if c16s != c32s:
+    c16e = syms['code16_end'] + 0xf0000
+    f16e = syms['final_code16_end']
+    if c16e != f16e:
         print "Error!  16bit code moved during linking (0x%x vs 0x%x)" % (
-            c32s, c16s)
+            c16e, f16e)
         sys.exit(1)
 
     sizefree = syms['freespace1_end'] - syms['freespace1_start']
     size16 = syms['code16_end'] - syms['code16_start'] - sizefree
     size32 = syms['code32_end'] - syms['code32_start']
     totalc = size16+size32
-    tablefree = syms['freespace2_end'] - syms['freespace2_start']
     print "16bit size: %d" % size16
     print "32bit size: %d" % size32
     print "Total size: %d  Free space: %d  Percent used: %.1f%%" % (
         totalc, sizefree
         , (totalc / float(size16+size32+sizefree)) * 100.0)
-    print "BIOS table space:  %d" % tablefree
 
 if __name__ == '__main__':
     main()
diff --git a/tools/layoutrom.py b/tools/layoutrom.py
index f1fe0e1..592893b 100755
--- a/tools/layoutrom.py
+++ b/tools/layoutrom.py
@@ -8,61 +8,128 @@
 import sys
 
 def main():
-    # Read in section names and sizes
+    # Get output name
+    outname = sys.argv[1]
 
-    # sections = [(idx, name, size, align), ...]
+    # Read in section names and sizes
+    # sections = [(size, align, name), ...]
     sections = []
     for line in sys.stdin.readlines():
         try:
             idx, name, size, vma, lma, fileoff, align = line.split()
             if align[:3] != '2**':
                 continue
-            sections.append((
-                int(idx), name, int(size, 16), int(align[3:])))
+            sections.append((int(size, 16), 2**int(align[3:]), name))
         except:
             pass
 
-    # fixedsections = [(addr, sectioninfo), ...]
-    fixedsections = []
+    doLayout(sections, outname)
+
+def alignpos(pos, alignbytes):
+    mask = alignbytes - 1
+    return (pos + mask) & ~mask
+
+def doLayout(sections, outname):
     textsections = []
     rodatasections = []
     datasections = []
+    # fixedsections = [(addr, sectioninfo, extasectionslist), ...]
+    fixedsections = []
+    # canrelocate = [(sectioninfo, list), ...]
+    canrelocate = []
 
     # Find desired sections.
     for section in sections:
-        name = section[1]
+        size, align, name = section
         if name[:11] == '.fixedaddr.':
             addr = int(name[11:], 16)
-            fixedsections.append((addr, section))
+            fixedsections.append((addr, section, []))
+            if align != 1:
+                print "Error: Fixed section %s has non-zero alignment (%d)" % (
+                    name, align)
+                sys.exit(1)
         if name[:6] == '.text.':
             textsections.append(section)
+            canrelocate.append((section, textsections))
         if name[:17] == '.rodata.__func__.' or name == '.rodata.str1.1':
             rodatasections.append(section)
+            #canrelocate.append((section, rodatasections))
         if name[:8] == '.data16.':
             datasections.append(section)
+            #canrelocate.append((section, datasections))
+
+    # Find freespace in fixed address area
+    fixedsections.sort()
+    # fixedAddr = [(freespace, sectioninfo), ...]
+    fixedAddr = []
+    for i in range(len(fixedsections)):
+        fixedsectioninfo = fixedsections[i]
+        addr, section, extrasectionslist = fixedsectioninfo
+        if i == len(fixedsections) - 1:
+            nextaddr = 0x10000
+        else:
+            nextaddr = fixedsections[i+1][0]
+        avail = nextaddr - addr - section[0]
+        fixedAddr.append((avail, fixedsectioninfo))
+
+    # Attempt to fit other sections into fixed area
+    fixedAddr.sort()
+    canrelocate.sort()
+    for freespace, fixedsectioninfo in fixedAddr:
+        fixedaddr, fixedsection, extrasections = fixedsectioninfo
+        addpos = fixedaddr + fixedsection[0]
+        nextfixedaddr = addpos + freespace
+#        print "Filling section %x uses %d, next=%x, available=%d" % (
+#            fixedaddr, fixedsection[0], nextfixedaddr, freespace)
+        while 1:
+            canfit = None
+            for fixedaddrinfo in canrelocate:
+                fitsection, inlist = fixedaddrinfo
+                fitnextaddr = alignpos(addpos, fitsection[1]) + fitsection[0]
+#                print "Test %s - %x vs %x" % (
+#                    fitsection[2], fitnextaddr, nextfixedaddr)
+                if fitnextaddr > nextfixedaddr:
+                    # Can't fit.
+                    break
+                canfit = (fitnextaddr, fixedaddrinfo)
+            if canfit is None:
+                break
+            # Found a section that can fit.
+            fitnextaddr, fixedaddrinfo = canfit
+            canrelocate.remove(fixedaddrinfo)
+            fitsection, inlist = fixedaddrinfo
+            inlist.remove(fitsection)
+            extrasections.append(fitsection)
+            addpos = fitnextaddr
+#            print "    Adding %s (size %d align %d)" % (
+#                fitsection[2], fitsection[0], fitsection[1])
 
     # Write regular sections
+    output = open(outname, 'wb')
     for section in textsections:
-        name = section[1]
-        sys.stdout.write("*(%s)\n" % (name,))
-    sys.stdout.write("code16_rodata = . ;\n")
+        name = section[2]
+        output.write("*(%s)\n" % (name,))
+    output.write("code16_rodata = . ;\n")
     for section in rodatasections:
-        name = section[1]
-        sys.stdout.write("*(%s)\n" % (name,))
+        name = section[2]
+        output.write("*(%s)\n" % (name,))
     for section in datasections:
-        name = section[1]
-        sys.stdout.write("*(%s)\n" % (name,))
+        name = section[2]
+        output.write("*(%s)\n" % (name,))
 
     # Write fixed sections
-    sys.stdout.write("freespace1_start = . ;\n")
+    output.write("freespace1_start = . ;\n")
     first = 1
-    for addr, section in fixedsections:
-        name = section[1]
-        sys.stdout.write(". = ( 0x%x - code16_start ) ;\n" % (addr,))
+    for addr, section, extrasections in fixedsections:
+        name = section[2]
+        output.write(". = ( 0x%x - code16_start ) ;\n" % (addr,))
         if first:
             first = 0
-            sys.stdout.write("freespace1_end = . ;\n")
-        sys.stdout.write("*(%s)\n" % (name,))
+            output.write("freespace1_end = . ;\n")
+        output.write("*(%s)\n" % (name,))
+        for extrasection in extrasections:
+            name = extrasection[2]
+            output.write("*(%s)\n" % (name,))
 
 if __name__ == '__main__':
     main()